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John I. Miller
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A mechanistic model and therapeutic interventions for COVID-19 involving a RAS-mediated bradykinin storm
MR Garvin, C Alvarez, JI Miller, ET Prates, AM Walker, BK Amos, AE Mast, ...
elife 9, e59177, 2020
4362020
SARS-CoV-2 suppresses anticoagulant and fibrinolytic gene expression in the lung
AE Mast, AS Wolberg, D Gailani, MR Garvin, C Alvarez, JI Miller, ...
Elife 10, e64330, 2021
522021
Oil hydrocarbon degradation by Caspian Sea microbial communities
JI Miller, S Techtmann, J Fortney, N Mahmoudi, D Joyner, J Liu, S Olesen, ...
Frontiers in microbiology 10, 995, 2019
372019
Microbial communities across global marine basins show important compositional similarities by depth
JI Miller, S Techtmann, D Joyner, N Mahmoudi, J Fortney, JA Fordyce, ...
MBio 11 (4), 10.1128/mbio. 01448-20, 2020
182020
Sustained ability of a natural microbial community to remove nitrate from groundwater
CJ Paradis, JI Miller, JW Moon, SJ Spencer, LM Lui, JD Van Nostrand, ...
Groundwater 60 (1), 99-111, 2022
92022
Genetics of varicose veins reveals polygenic architecture and genetic overlap with arterial and venous disease
MG Levin, JE Huffman, A Verma, KA Sullivan, AA Rodriguez, D Kainer, ...
Nature Cardiovascular Research 2 (1), 44-57, 2023
22023
Exploring the role of plant lysin motif receptor-like kinases in regulating plant-microbe interactions in the bioenergy crop Populus
KR Cope, ET Prates, JI Miller, ONA Demerdash, M Shah, D Kainer, A Cliff, ...
Computational and Structural Biotechnology Journal 21, 1122-1139, 2023
22023
Response to comment on ¡SARS-CoV-2 suppresses anticoagulant and fibrinolytic gene expression in the lung¢
AE Mast, AS Wolberg, D Gailani, MR Garvin, C Alvarez, JI Miller, P Jones, ...
Elife 11, e74951, 2022
22022
Digging deeper into GWAS signal using GRIN implicates additional genes contributing to suicidal behavior
KA Sullivan, M Lane, M Cashman, JI Miller, M Pavicic, AM Walker, A Cliff, ...
medRxiv, 2022.04. 20.22273895, 2022
22022
Comparing the response of the indigenous microbial community to crude oil amendment in oxic versus hypoxic conditions
ZG Griffiths, AD Putt, JI Miller, MF Campa, DC Joyner, O Pelz, ...
Frontiers in Microbiomes 2, 1270352, 2023
12023
dkainer/RWRtoolkit
D Kainer, M Lane, K Sullivan, M Cashman, JI Miller
Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States), 2022
12022
Potential for oil hydrocarbon biodegradation by microbial communities in marine environments
J Miller
University of Tennessee, 2019
12019
Multi-omic network analysis identifies dysregulated neurobiological pathways in opioid addiction
KA Sullivan, D Kainer, M Lane, M Cashman, JI Miller, MR Garvin, ...
medRxiv, 2024.01. 04.24300831, 2024
2024
78. NETWORK BIOLOGY ALGORITHMS IDENTIFY BIOLOGICAL PATHWAYS UNDERLYING CIGARETTE SMOKING BEHAVIORS
K Sullivan, JI Miller, D Kainer, M Lane, M Cashman, MR Garvin, ...
European Neuropsychopharmacology 75, S98-S99, 2023
2023
RWRtoolkit-a set of command-line and R tools for performing Random-walk with Restart analyses on multiplex networks in any species
D Kainer, M Lane, KA Sullivan, M Cashman, JI Miller
Oak Ridge National Laboratory, 2022
2022
Antiviral Strategies Against SARS-CoV-2: A Systems Biology Approach
ET Prates, MR Garvin, P Jones, JI Miller, KA Sullivan, A Cliff, ...
SARS-CoV-2: Methods and Protocols, 317-351, 2022
2022
Antiviral Strategies Against SARS-CoV-2: A Systems Biology Approach
E Teixeira Prates, M Garvin, PC Jones, J Miller, K Sullivan, A Cliff, ...
Oak Ridge National Lab.(ORNL), Oak Ridge, TN (United States), 2022
2022
Methods of treating covid-19 pathogenesis
DA Jacobson, ET Prates, JI Miller, MR Garvin
US Patent App. 17/368,911, 2022
2022
Response to comment on ¡SARS-CoV-2 suppresses anticoagulant and fibrinolytic gene expression in the lung¢
DA Jacobson, AM Mast, AS Wolberg, D Gailani, MR Garvin, PC Jones, ...
eLife 11 (na), 2022
2022
Microbial Communities across Global Marine Basins Show Important Compositional
JI Miller, S Techtmann, D Joyner
mBio, 11 (4), 2020
2020
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Articles 1–20