| SQANTI: extensive characterization of long-read transcript sequences for quality control in full-length transcriptome identification and quantification M Tardaguila, L De La Fuente, C Marti, C Pereira, FJ Pardo-Palacios, ... Genome research 28 (3), 396-411, 2018 | 331 | 2018 |
| Standardized benchmarking in the quest for orthologs AM Altenhoff, B Boeckmann, S Capella-Gutierrez, DA Dalquen, T DeLuca, ... Nature methods 13 (5), 425-430, 2016 | 230 | 2016 |
| GRAM-CNN: a deep learning approach with local context for named entity recognition in biomedical text Q Zhu, X Li, A Conesa, C Pereira Bioinformatics 34 (9), 1547-1554, 2018 | 159 | 2018 |
| Advances and applications in the quest for orthologs N Glover, C Dessimoz, I Ebersberger, SK Forslund, T Gabaldón, ... Molecular biology and evolution 36 (10), 2157-2164, 2019 | 87 | 2019 |
| Comparative metagenomics provides insight into the ecosystem functioning of the Shark Bay Stromatolites, Western Australia J Babilonia, A Conesa, G Casaburi, C Pereira, AS Louyakis, RP Reid, ... Frontiers in microbiology 9, 348343, 2018 | 42 | 2018 |
| Gearing up to handle the mosaic nature of life in the quest for orthologs K Forslund, C Pereira, S Capella-Gutierrez, AS da Silva, A Altenhoff, ... Bioinformatics 34 (2), 323-329, 2018 | 34 | 2018 |
| A meta-approach for improving the prediction and the functional annotation of ortholog groups C Pereira, A Denise, O Lespinet BMC genomics 15, 1-8, 2014 | 26 | 2014 |
| STRASS: A Light and Effective Method for Extractive Summarization Based on Sentence Embeddings L Bouscarrat, A Bonnefoy, T Peel, C Pereira ACL student workshop, 2019 | 24 | 2019 |
| Assessment of unconventional antimicrobial compounds for the control of ˇCandidatus Liberibacter asiaticus˘, the causative agent of citrus greening disease CL Gardner, DR da Silva, FA Pagliai, L Pan, KA Padgett-Pagliai, ... Scientific reports 10 (1), 5395, 2020 | 20 | 2020 |
| Corrigendum: SQANTI: extensive characterization of long-read transcript sequences for quality control in full-length transcriptome identification and quantification M Tardaguila, L De La Fuente, C Marti, C Pereira, FJ Pardo-Palacios, ... Genome research 28 (7), 1096, 2018 | 16 | 2018 |
| Quest for Orthologs consortium, Toni Gabaldón, Suzanna E Lewis, Paul D Thomas, Erik Sonnhammer, and Christophe Dessimoz. Standardized benchmarking in the quest for orthologs AM Altenhoff, B Boeckmann, S Capella-Gutierrez, DA Dalquen, T DeLuca, ... Nature Methods 13, 425-430, 2016 | 8 | 2016 |
| Francisco Jose Pardo-Palacios, Hector Del Risco, Marc Ferrell, et al. 2018.“SQANTI: Extensive Characterization of Long-Read Transcript Sequences for Quality Control in Full … M Tardaguila, L de la Fuente, C Marti, C Pereira Genome Research, 0 | 8 | |
| Padhoc: a computational pipeline for pathway reconstruction on the fly S Casani-Galdon, C Pereira, A Conesa Bioinformatics 36 (Supplement_2), i795–i803, 2020 | 4 | 2020 |
| Particlegrid: Enabling deep learning using 3d representation of materials S Zaman, E Ferguson, C Pereira, D Akhivarov, M Araya-Polo, K Chiu 2022 IEEE 18th International Conference on e-Science (e-Science), 378-388, 2022 | 2 | 2022 |
| Simulation and optimization of fixed bed and moving bed TSA processes for post-combustion CO2 capture. S Krishnamurthy, R Blom, G Mondino, S Cloete, J Morud, A Zaabout, ... Computer Aided Chemical Engineering 52, 313-318, 2023 | 1 | 2023 |
| Nouvelles approches bioinformatiques pour l'étude à grande échelle de l'évolution des activités enzymatiques C Pereira Université Paris Sud-Paris XI, 2015 | 1 | 2015 |
| Process-Based Screening of MOFs for Direct Air Capture (DAC) BM Balasubramaniam, O Kwon, J Luo, M Gibaldi, T Woo, PT Thierry, ... 2022 AIChE Annual Meeting, 2022 | | 2022 |
| Practically Achievable Process Limits for a Temperature Swing Adsorption Process for CO2 Capture from Ngcc Flue Gas Y Bharath, KN Pai, PT Thierry, S Lethier, P Llewellyn, C Pereira, V Pugnet, ... 2022 AIChE Annual Meeting, 2022 | | 2022 |
| ParticleGrid: A Library for 3D Molecular Representation for Deep Learning S Zaman, K Chiu, E Ferguson, M Araya, D Akhiyarov, C Pereira APS March Meeting Abstracts 2022, G13. 005, 2022 | | 2022 |
| MoleculeFlow: A Deep Generative Workflow for 3D Molecular Generation E Ferguson, S Zaman, M Araya-Polo, D Akhiyarov, K Chiu, C Pereira ELLIS Machine Learning for Molecule Discovery Workshop, https://cloud.ml.jku …, 2021 | | 2021 |
Ana ConesaInstitute for Integrative Systems Biology, Spanish National Research CouncilVerified email at csic.es
