| Stochastic vs. deterministic modeling of intracellular viral kinetics R Srivastava, L You, J Summers, J Yin Journal of theoretical biology 218 (3), 309-321, 2002 | 277 | 2002 |
| Effects of Escherichia coli Physiology on Growth of Phage T7 In Vivo and In Silico L You, PF Suthers, J Yin Journal of bacteriology 184 (7), 1888-1894, 2002 | 186 | 2002 |
| Bacteriophage plaques: theory and analysis ST Abedon, J Yin Bacteriophages, 161-174, 2009 | 171 | 2009 |
| Computation, prediction, and experimental tests of fitness for bacteriophage T7 mutants with permuted genomes D Endy, L You, J Yin, IJ Molineux Proceedings of the National Academy of Sciences 97 (10), 5375-5380, 2000 | 148 | 2000 |
| Quantitative intracellular kinetics of HIV type 1 B Reddy, J Yin AIDS research and human retroviruses 15 (3), 273-283, 1999 | 146 | 1999 |
| Intracellular kinetics of a growing virus: a genetically structured simulation for bacteriophage T7 D Endy, D Kong, J Yin Biotechnology and Bioengineering 55 (2), 375-389, 1997 | 143 | 1997 |
| Replication of viruses in a growing plaque: a reaction-diffusion model J Yin, JS McCaskill Biophysical journal 61 (6), 1540-1549, 1992 | 140 | 1992 |
| Kinetics of virus production from single cells A Timm, J Yin Virology 424 (1), 11-17, 2012 | 96 | 2012 |
| Population dynamics of an RNA virus and its defective interfering particles in passage cultures KAS Thompson, J Yin Virology journal 7 (1), 1-10, 2010 | 94 | 2010 |
| Growth of an RNA virus in single cells reveals a broad fitness distribution Y Zhu, A Yongky, J Yin Virology 385 (1), 39-46, 2009 | 93 | 2009 |
| Evolution of bacteriophage T7 in a growing plaque J Yin Journal of Bacteriology 175 (5), 1272-1277, 1993 | 93 | 1993 |
| Dependence of Epistasis on Environment and Mutation Severity as Revealed by in Silico Mutagenesis of Phage T7 L You, J Yin Genetics 160 (4), 1273-1281, 2002 | 91 | 2002 |
| Kinetic modeling of virus growth in cells J Yin, J Redovich Microbiology and Molecular Biology Reviews 82 (2), e00066-17, 2018 | 74 | 2018 |
| Amplification and spread of viruses in a growing plaque L You, J Yin Journal of theoretical biology 200 (4), 365-373, 1999 | 74 | 1999 |
| Thermostability of reovirus disassembly intermediates (ISVPs) correlates with genetic, biochemical, and thermodynamic properties of major surface protein ě1 JK Middleton, TF Severson, K Chandran, AL Gillian, J Yin, ML Nibert Journal of virology 76 (3), 1051-1061, 2002 | 71 | 2002 |
| ASTRAL-MP: scaling ASTRAL to very large datasets using randomization and parallelization J Yin, C Zhang, S Mirarab Bioinformatics 35 (20), 3961-3969, 2019 | 65 | 2019 |
| Subsurface oxidation of polyethylene BM Daly, J Yin Journal of Biomedical Materials Research: An Official Journal of The Society …, 1998 | 62 | 1998 |
| Multiple-hit inhibition of infection by defective interfering particles KAS Thompson, GA Rempala, J Yin The Journal of General Virology 90 (Pt 4), 888, 2009 | 61 | 2009 |
| Dynamics of viral infections: incorporating both the intracellular and extracellular levels EL Haseltine, JB Rawlings, J Yin Computers & chemical engineering 29 (3), 675-686, 2005 | 59 | 2005 |
| Modeling biological systems using Dynetica—a simulator of dynamic networks L You, A Hoonlor, J Yin Bioinformatics 19 (3), 435-436, 2003 | 59 | 2003 |
