| MetaPhlAn2 for Enhanced Metagenomic Taxonomic Profiling DT Truong, EA Franzosa, TL Tickle, M Scholz, G Weingart, E Pasolli, ... Nature Methods 12 (10), 902-903, 2015 | 1441 | 2015 |
| Extensive Unexplored Human Microbiome Diversity Revealed by Over 150,000 Genomes from Metagenomes Spanning Age, Geography, and Lifestyle E Pasolli, F Asnicar, S Manara, M Zolfo, N Karcher, F Armanini, F Beghini, ... Cell 176 (3), 2019 | 706 | 2019 |
| Mother-to-Infant Microbial Transmission from Different Body Sites Shapes the Developing Infant Gut Microbiome P Ferretti, E Pasolli*, A Tett*, F Asnicar*, V Gorfer, S Fedi, F Armanini, ... Cell Host & Microbe 24 (1), 133-145. e5, 2018 | 556 | 2018 |
| Microbial Strain-Level Population Structure and Genetic Diversity from Metagenomes DT Truong, A Tett, E Pasolli, C Huttenhower, N Segata Genome Research 27 (4), 626-638, 2017 | 416 | 2017 |
| Metagenomic Analysis of Colorectal Cancer Datasets Identifies Cross-Cohort Microbial Diagnostic Signatures and a Link with Choline Degradation AM Thomas, P Manghi, F Asnicar, E Pasolli, F Armanini, M Zolfo, ... Nature Medicine 25, 667-678, 2019 | 346 | 2019 |
| Machine Learning Meta-Analysis of Large Metagenomic Datasets: Tools and Biological Insights E Pasolli, DT Truong, F Malik, L Waldron, N Segata PLoS Computational Biology 12 (7), e1004977, 2016 | 331 | 2016 |
| Strain-Level Microbial Epidemiology and Population Genomics from Shotgun Metagenomics M Scholz*, DV Ward*, E Pasolli*, T Tolio, M Zolfo, F Asnicar, DT Truong, ... Nature Methods 13 (5), 435-438, 2016 | 301 | 2016 |
| Automatic Analysis of GPR Images: A Pattern-Recognition Approach E Pasolli, F Melgani, M Donelli IEEE Transactions on Geoscience and Remote Sensing 47 (7), 2206-2217, 2009 | 244 | 2009 |
| Strain-level Analysis of Mother-to-Child Bacterial Transmission During the First Few Months of Life M Yassour, E Jason, LJ Hogstrom, TD Arthur, S Tripathi, H Siljander, ... Cell Host & Microbe 24 (1), 146-154. e4, 2018 | 213 | 2018 |
| Using Active Learning to Adapt Remote Sensing Image Classifiers D Tuia, E Pasolli, WJ Emery Remote Sensing of Environment 115 (9), 2232-2242, 2011 | 210 | 2011 |
| Maternal Inheritance of Bifidobacterial Communities and Bifidophages in Infants through Vertical Transmission S Duranti, GA Lugli, L Mancabelli, F Armanini, F Turroni, K James, ... Microbiome 5 (1), 66, 2017 | 203 | 2017 |
| Accessible, Curated Metagenomic Data through ExperimentHub E Pasolli*, L Schiffer*, P Manghi*, A Renson, V Obenchain, DT Truong, ... Nature Methods 14 (11), 1023-1024, 2017 | 185 | 2017 |
| The Prevotella Copri Complex Comprises Four Distinct Clades That Are Underrepresented in Westernised Populations A Tett, KD Huang, F Asnicar, H Fehlner-Peach, E Pasolli, N Karcher, ... Cell Host & Microbe 26 (5), 666-679.e7, 2019 | 170 | 2019 |
| Distinct Genetic and Functional Traits of Human Intestinal Prevotella Copri Strains are Associated with Different Habitual Diets F De Filippis, E Pasolli, A Tett, S Tarallo, A Naccarati, M De Angelis, ... Cell Host & Microbe 25 (3), 444-453. e3, 2019 | 170 | 2019 |
| Clustering of Hyperspectral Images based on Multiobjective Particle Swarm Optimization A Paoli, F Melgani, E Pasolli IEEE Transactions on Geoscience and Remote Sensing 47 (12), 4175-4188, 2009 | 163 | 2009 |
| SVM Active Learning Approach for Image Classification Using Spatial Information E Pasolli, F Melgani, D Tuia, F Pacifici, WJ Emery IEEE Transactions on Geoscience and Remote Sensing 52 (4), 2217-2233, 2014 | 150 | 2014 |
| Mediterranean Diet Intervention in Overweight and Obese Subjects Lowers Plasma Cholesterol and Causes Changes in the Gut Microbiome and Metabolome Independently of Energy Intake V Meslier, M Laiola, HM Roager, F De Filippis, H Roume, B Quinquis, ... Gut, 2020 | 142 | 2020 |
| Unexplored Diversity and Strain-Level Structure of the Skin Microbiome Associated with Psoriasis A Tett, E Pasolli*, S Farina*, DT Truong*, F Asnicar, M Zolfo, F Beghini, ... npj Biofilms and Microbiomes 3 (1), 14, 2017 | 132 | 2017 |
| Precise Phylogenetic Analysis of Microbial Isolates and Genomes from Metagenomes using PhyloPhlAn 3.0 F Asnicar, AM Thomas, F Beghini, C Mengoni, S Manara, P Manghi, ... Nature Communications 11 (1), 1-10, 2020 | 124 | 2020 |
| Large-Scale Comparative Metagenomics of Blastocystis, a Common Member of the Human Gut Microbiome F Beghini*, E Pasolli*, TD Truong, L Putignani, SM Cacciò, N Segata The ISME journal 11, 2848-2863, 2017 | 99 | 2017 |
Nicola SegataDepartment CIBIO, University of TrentoVerified email at unitn.it
