| Growing functional modules from a seed protein via integration of protein interaction and gene expression data IA Maraziotis, K Dimitrakopoulou, A Bezerianos Bmc Bioinformatics 8, 1-15, 2007 | 108 | 2007 |
| SARS-CoV-2 RNAemia and proteomic trajectories inform prognostication in COVID-19 patients admitted to intensive care C Gutmann, K Takov, SA Burnap, B Singh, H Ali, K Theofilatos, E Reed, ... Nature communications 12 (1), 3406, 2021 | 104 | 2021 |
| An in silico method for detecting overlapping functional modules from composite biological networks IA Maraziotis, K Dimitrakopoulou, A Bezerianos BMC Systems Biology 2, 1-14, 2008 | 39 | 2008 |
| CHRONOS: a time-varying method for microRNA-mediated subpathway enrichment analysis AG Vrahatis, K Dimitrakopoulou, P Balomenos, AK Tsakalidis, ... Bioinformatics 32 (6), 884-892, 2016 | 33 | 2016 |
| Expression of Nestin associates with BRCA1 mutations, a basal-like phenotype and aggressive breast cancer Scientific Reports 7, 1089, 2017 | 24* | 2017 |
| Dynamic gene network reconstruction from gene expression data in mice after influenza A (H1N1) infection K Dimitrakopoulou, C Tsimpouris, G Papadopoulos, C Pommerenke, ... Journal of clinical bioinformatics 1 (1), 1-13, 2011 | 22 | 2011 |
| Integromics network meta-analysis on cardiac aging offers robust multi-layer modular signatures and reveals micronome synergism. K Dimitrakopoulou, GA Vrahatis, A Bezerianos BMC Genomics, 0 | 22* | |
| Tamoxifen integromics and personalized medicine: dynamic modular transformations underpinning response to tamoxifen in breast cancer treatment K Dimitrakopoulou, GN Dimitrakopoulos, KN Sgarbas, A Bezerianos Omics: a journal of integrative biology 18 (1), 15-33, 2014 | 20 | 2014 |
| Cervicovaginal microbiota and metabolome predict preterm birth risk in an ethnically diverse cohort F Flaviani, NL Hezelgrave, T Kanno, EM Prosdocimi, E Chin-Smith, ... JCI insight 6 (16), 2021 | 19 | 2021 |
| The developing human connectome project neonatal data release AD Edwards, D Rueckert, SM Smith, SA Seada, A Alansary, J Almalbis, ... Frontiers in neuroscience 16, 2022 | 13 | 2022 |
| Influenza A immunomics and public health omics: the dynamic pathway interplay in host response to H1N1 infection K Dimitrakopoulou, GN Dimitrakopoulos, E Wilk, C Tsimpouris, ... Omics: a journal of integrative biology 18 (3), 167-183, 2014 | 12 | 2014 |
| Deblender: a semi−/unsupervised multi-operational computational method for complete deconvolution of expression data from heterogeneous samples K Dimitrakopoulou, E Wik, LA Akslen, I Jonassen BMC bioinformatics 19, 1-17, 2018 | 11 | 2018 |
| SARS-CoV-2 RNAemia and proteomic trajectories inform prognostication in COVID-19 patients admitted to intensive care. Nat Commun. 2021; 12: 3406 C Gutmann, K Takov, SA Burnap, B Singh, H Ali, K Theofilatos, E Reed, ... Preprint not peer reviewed Preprint not peer reviewed Preprint not peer …, 0 | 9 | |
| Supervised method for construction of microRNA-mRNA networks: Application in cardiac tissue aging dataset GN Dimitrakopoulos, K Dimitrakopoulou, IA Maraziotis, K Sgarbas, ... 2014 36th Annual International Conference of the IEEE Engineering in …, 2014 | 8 | 2014 |
| OLYMPUS: an automated hybrid clustering method in time series gene expression. Case study: host response after Influenza A (H1N1) infection K Dimitrakopoulou, AG Vrahatis, E Wilk, AK Tsakalidis, A Bezerianos Computer methods and programs in biomedicine 111 (3), 650-661, 2013 | 6 | 2013 |
| SARS-CoV-2 RNAemia and proteomic biomarker trajectory inform prognostication in COVID-19 patients admitted to intensive care M Mayr, C Gutmann, K Takov, S Burnap, B Singh, K Theofilatos, E Reed, ... Research Square, 2020 | 3 | 2020 |
| Detecting perturbed subpathways towards mouse lung regeneration following H1N1 influenza infection AG Vrahatis, K Dimitrakopoulou, A Kanavos, S Sioutas, A Tsakalidis Computation 5 (2), 20, 2017 | 3 | 2017 |
| Network-based modular markers of aging across different tissues AG Vrahatis, K Dimitrakopoulou, GN Dimitrakopoulos, KN Sgarbas, ... XIII Mediterranean Conference on Medical and Biological Engineering and …, 2014 | 2 | 2014 |
| Aging Integromics: Module-Based Markers of Heart Aging from Multi-omics Data K Dimitrakopoulou, AG Vrahatis, GN Dimitrakopoulos, A Bezerianos The 15th International Conference on Biomedical Engineering: ICBME 2013, 4th …, 2014 | 2 | 2014 |
| Revealing the dynamic modularity of composite biological networks in breast cancer treatment K Dimitrakopoulou, G Dimitrakopoulos, EI Zacharaki, IA Maraziotis, ... 2012 Annual International Conference of the IEEE Engineering in Medicine and …, 2012 | 2 | 2012 |
