Soil characteristics and land-use drive bacterial community assembly patterns SE Barnett, ND Youngblut, DH Buckley FEMS Microbiology Ecology 96 (1), fiz194, 2020 | 75 | 2020 |
Inhibition of fungal pathogens across genotypes and temperatures by amphibian skin bacteria CR Muletz-Wolz, JG Almario, SE Barnett, A Martel, F Pasmans Frontiers in microbiology 8, 291948, 2017 | 69 | 2017 |
Evidence for phylogenetically and catabolically diverse active diazotrophs in deep-sea sediment BJ Kapili, SE Barnett, DH Buckley, AE Dekas The ISME journal 14 (4), 971-983, 2020 | 48 | 2020 |
HTSSIP: an R package for analysis of high throughput sequencing data from nucleic acid stable isotope probing (SIP) experiments ND Youngblut, SE Barnett, DH Buckley PLoS One 13 (1), e0189616, 2018 | 45 | 2018 |
Multisubstrate DNA stable isotope probing reveals guild structure of bacteria that mediate soil carbon cycling SE Barnett, ND Youngblut, CN Koechli, DH Buckley Proceedings of the National Academy of Sciences 118 (47), e2115292118, 2021 | 44 | 2021 |
SIPSim: a modeling toolkit to predict accuracy and aid design of DNA-SIP experiments ND Youngblut, SE Barnett, DH Buckley Frontiers in microbiology 9, 309232, 2018 | 44 | 2018 |
Diverse genotypes of the amphibian‐killing fungus produce distinct phenotypes through plastic responses to temperature CR Muletz‐Wolz, SE Barnett, GV DiRenzo, KR Zamudio, LF Toledo, ... Journal of evolutionary biology 32 (3), 287-298, 2019 | 26 | 2019 |
Simulating metagenomic stable isotope probing datasets with MetaSIPSim SE Barnett, DH Buckley BMC Bioinformatics 21 (1), 37, 2020 | 19 | 2020 |
Evaluating the Microbiome of Hemp SE Barnett, AR Cala, JL Hansen, J Crawford, DR Viands, LB Smart, ... Phytobiomes Journal 4 (4), 351-363, 2020 | 14 | 2020 |
Community organization and metagenomics of bacterial assemblages across local scale pH gradients in northern forest soils JB Yavitt, CA Roco, SJ Debenport, SE Barnett, JP Shapleigh Microbial ecology 81 (3), 758-769, 2021 | 12 | 2021 |
Data analysis for DNA stable isotope probing experiments using multiple window high-resolution SIP SE Barnett, ND Youngblut, DH Buckley Stable isotope probing: methods and protocols, 109-128, 2019 | 9 | 2019 |
Tracing carbon metabolism with stable isotope metabolomics reveals the legacy of diverse carbon sources in soil RC Wilhelm, SE Barnett, TL Swenson, ND Youngblut, CN Koechli, ... Applied and Environmental Microbiology 88 (22), e00839-22, 2022 | 6 | 2022 |
Bacterial community dynamics explain carbon mineralization and assimilation in soils of different land-use history SE Barnett, ND Youngblut, DH Buckley Environmental Microbiology 24 (11), 5230–5247, 2022 | 5 | 2022 |
Genomic features predict bacterial life history strategies in soil, as identified by metagenomic stable isotope probing SE Barnett, R Egan, B Foster, EA Eloe-Fadrosh, DH Buckley Mbio 14 (2), e03584-22, 2023 | 4 | 2023 |
Metagenomic stable isotope probing reveals bacteriophage participation in soil carbon cycling SE Barnett, DH Buckley Environmental Microbiology, 1– 11, 2023 | 4 | 2023 |
Controls of Microbially Mediated Soil Carbon Cycling: An Examination of the Effects of Land-use and Life History Strategy on Soil Bacterial Diversity and Activity SE Barnett Cornell University, 2021 | 1 | 2021 |
Arrive and wait: Inactive bacterial taxa contribute to perceived soil microbiome resilience after a multidecadal press disturbance SE Barnett, A Shade Ecology letters 27 (3), e14393, 2024 | | 2024 |
Identifying active diazotrophs in deep-sea sediment AE Dekas, BJ Kapili, SE Barnett, DH Buckley Ocean Sciences Meeting 2020, 2020 | | 2020 |
Evidence for phylogenetically and catabolically diverse diazotrophs in the deep-sea benthos BJ Kapili, SE Barnett, DH Buckley, AE Dekas AGU Fall Meeting Abstracts 2018, B51D-03, 2018 | | 2018 |
Evaluating the Microbiome of Industrial Hemp AR Cala, S Barnett, J Hansen, J Crawford, D Viands, L Smart, D Buckley, ... International Congress of Plant Pathology (ICPP) 2018: Plant Health in A …, 2018 | | 2018 |