Anastasis Oulas
Anastasis Oulas
Research fellow at the Bioinformatics Group, The Cyprus Institute of Neurology and Genetics (CING)
Verified email at cing.ac.cy
TitleCited byYear
Metagenomics: tools and insights for analyzing next-generation sequencing data derived from biodiversity studies
A Oulas, C Pavloudi, P Polymenakou, GA Pavlopoulos, N Papanikolaou, ...
Bioinformatics and biology insights 9, BBI. S12462, 2015
1992015
Improved grading and survival prediction of human astrocytic brain tumors by artificial neural network analysis of gene expression microarray data
LP Petalidis, A Oulas, M Backlund, MT Wayland, L Liu, K Plant, ...
Molecular cancer therapeutics 7 (5), 1013-1024, 2008
722008
Prediction of novel microRNA genes in cancer-associated genomic regions—a combined computational and experimental approach
A Oulas, A Boutla, K Gkirtzou, M Reczko, K Kalantidis, P Poirazi
Nucleic acids research 37 (10), 3276-3287, 2009
612009
Unraveling genomic variation from next generation sequencing data
GA Pavlopoulos, A Oulas, E Iacucci, A Sifrim, Y Moreau, R Schneider, ...
BioData mining 6 (1), 13, 2013
552013
Impaired clearance of apoptotic cells leads to HMGB1 release in the bone marrow of patients with myelodysplastic syndromes and induces TLR4-mediated cytokine production
M Velegraki, E Papakonstanti, I Mavroudi, M Psyllaki, C Tsatsanis, ...
Haematologica 98 (8), 1206-1215, 2013
312013
MicroRNAs and cancer—The search begins!
A Oulas, M Reczko, P Poirazi
IEEE Transactions on Information Technology in Biomedicine 13 (1), 67-77, 2009
312009
Prediction of miRNA targets
A Oulas, N Karathanasis, A Louloupi, GA Pavlopoulos, P Poirazi, ...
RNA Bioinformatics, 207-229, 2015
272015
A new microRNA target prediction tool identifies a novel interaction of a putative miRNA with CCND2
A Oulas, N Karathanasis, A Louloupi, I Iliopoulos, K Kalantidis, P Poirazi
RNA biology 9 (9), 1196-1207, 2012
172012
Metagenomic investigation of the geologically unique H ellenic V olcanic A rc reveals a distinctive ecosystem with unexpected physiology
A Oulas, PN Polymenakou, R Seshadri, HJ Tripp, M Mandalakis, ...
Environmental microbiology 18 (4), 1122-1136, 2016
142016
Salinity is the major factor influencing the sediment bacterial communities in a Mediterranean lagoonal complex (Amvrakikos Gulf, Ionian Sea)
C Pavloudi, A Oulas, K Vasileiadou, E Sarropoulou, G Kotoulas, ...
Marine genomics 28, 71-81, 2016
112016
Systems bioinformatics: increasing precision of computational diagnostics and therapeutics through network-based approaches
A Oulas, G Minadakis, M Zachariou, K Sokratous, MM Bourdakou, ...
Briefings in bioinformatics 20 (3), 806-824, 2017
102017
Seqenv: linking sequences to environments through text mining
L Sinclair, UZ Ijaz, LJ Jensen, MJL Coolen, C Gubry-Rangin, ...
PeerJ 4, e2690, 2016
102016
Sediment microbial taxonomic and functional diversity in a natural salinity gradient challenge Remane’s “species minimum” concept
C Pavloudi, JB Kristoffersen, A Oulas, M De Troch, C Arvanitidis
PeerJ 5, e3687, 2017
92017
Positioning Europe for the EPITRANSCRIPTOMICS challenge
MF Jantsch, A Quattrone, M O'Connell, M Helm, M Frye, ...
RNA biology 15 (6), 829-831, 2018
82018
Comparative genome analyses of novel Mangrovimonas-like strains isolated from estuarine mangrove sediments reveal xylan and arabinan utilization genes
B Dinesh, NS Lau, G Furusawa, SW Kim, TD Taylor, SY Foong, ...
Marine genomics 25, 115-121, 2016
82016
Pyrosequencing analysis of microbial communities reveals dominant cosmopolitan phylotypes in deep-sea sediments of the eastern Mediterranean Sea
PN Polymenakou, CA Christakis, M Mandalakis, A Oulas
Research in microbiology 166 (5), 448-457, 2015
82015
Finding cancer-associated miRNAs: methods and tools
A Oulas, N Karathanasis, A Louloupi, P Poirazi
Molecular biotechnology 49 (1), 97-107, 2011
82011
Integrating multi-source information on a single network to detect disease-related clusters of molecular mechanisms
M Zachariou, G Minadakis, A Oulas, S Afxenti, GM Spyrou
Journal of proteomics 188, 15-29, 2018
72018
Metagenomic 16s rRNA investigation of microbial communities in the Black Sea estuaries in South-West of Ukraine.
O Bobrova, JB Kristoffersen, A Oulas, V Ivanytsia
Acta Biochimica Polonica 63 (2), 315-319, 2016
72016
Utilization of SSCprofiler to predict a new miRNA gene
A Oulas, P Poirazi
MicroRNA and Cancer, 243-252, 2011
72011
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Articles 1–20