Anastasis Oulas
Anastasis Oulas
Research fellow at the Bioinformatics Group, The Cyprus Institute of Neurology and Genetics (CING)
Verified email at cing.ac.cy
TitleCited byYear
Metagenomics: tools and insights for analyzing next-generation sequencing data derived from biodiversity studies
A Oulas, C Pavloudi, P Polymenakou, GA Pavlopoulos, N Papanikolaou, ...
Bioinformatics and biology insights 9, BBI. S12462, 2015
2262015
Improved grading and survival prediction of human astrocytic brain tumors by artificial neural network analysis of gene expression microarray data
LP Petalidis, A Oulas, M Backlund, MT Wayland, L Liu, K Plant, ...
Molecular cancer therapeutics 7 (5), 1013-1024, 2008
752008
Prediction of novel microRNA genes in cancer-associated genomic regions—a combined computational and experimental approach
A Oulas, A Boutla, K Gkirtzou, M Reczko, K Kalantidis, P Poirazi
Nucleic acids research 37 (10), 3276-3287, 2009
632009
Unraveling genomic variation from next generation sequencing data
GA Pavlopoulos, A Oulas, E Iacucci, A Sifrim, Y Moreau, R Schneider, ...
BioData mining 6 (1), 13, 2013
582013
Impaired clearance of apoptotic cells leads to HMGB1 release in the bone marrow of patients with myelodysplastic syndromes and induces TLR4-mediated cytokine production
M Velegraki, E Papakonstanti, I Mavroudi, M Psyllaki, C Tsatsanis, ...
Haematologica 98 (8), 1206-1215, 2013
322013
Prediction of miRNA targets
A Oulas, N Karathanasis, A Louloupi, GA Pavlopoulos, P Poirazi, ...
RNA Bioinformatics, 207-229, 2015
312015
MicroRNAs and cancer—The search begins!
A Oulas, M Reczko, P Poirazi
IEEE Transactions on Information Technology in Biomedicine 13 (1), 67-77, 2009
312009
A new microRNA target prediction tool identifies a novel interaction of a putative miRNA with CCND2
A Oulas, N Karathanasis, A Louloupi, I Iliopoulos, K Kalantidis, P Poirazi
RNA biology 9 (9), 1196-1207, 2012
172012
Systems bioinformatics: increasing precision of computational diagnostics and therapeutics through network-based approaches
A Oulas, G Minadakis, M Zachariou, K Sokratous, MM Bourdakou, ...
Briefings in bioinformatics 20 (3), 806-824, 2019
162019
Seqenv: linking sequences to environments through text mining
L Sinclair, UZ Ijaz, LJ Jensen, MJL Coolen, C Gubry-Rangin, ...
PeerJ 4, e2690, 2016
142016
Salinity is the major factor influencing the sediment bacterial communities in a Mediterranean lagoonal complex (Amvrakikos Gulf, Ionian Sea)
C Pavloudi, A Oulas, K Vasileiadou, E Sarropoulou, G Kotoulas, ...
Marine genomics 28, 71-81, 2016
132016
Metagenomic investigation of the geologically unique H ellenic V olcanic A rc reveals a distinctive ecosystem with unexpected physiology
A Oulas, PN Polymenakou, R Seshadri, HJ Tripp, M Mandalakis, ...
Environmental microbiology 18 (4), 1122-1136, 2016
132016
Positioning Europe for the EPITRANSCRIPTOMICS challenge
MF Jantsch, A Quattrone, M O'Connell, M Helm, M Frye, ...
RNA biology 15 (6), 829-831, 2018
112018
Sediment microbial taxonomic and functional diversity in a natural salinity gradient challenge Remane’s “species minimum” concept
C Pavloudi, JB Kristoffersen, A Oulas, M De Troch, C Arvanitidis
PeerJ 5, e3687, 2017
112017
Comparative genome analyses of novel Mangrovimonas-like strains isolated from estuarine mangrove sediments reveal xylan and arabinan utilization genes
B Dinesh, NS Lau, G Furusawa, SW Kim, TD Taylor, SY Foong, ...
Marine genomics 25, 115-121, 2016
112016
Integrating multi-source information on a single network to detect disease-related clusters of molecular mechanisms
M Zachariou, G Minadakis, A Oulas, S Afxenti, GM Spyrou
Journal of proteomics 188, 15-29, 2018
102018
PathwayConnector: finding complementary pathways to enhance functional analysis
G Minadakis, M Zachariou, A Oulas, GM Spyrou
Bioinformatics 35 (5), 889-891, 2019
82019
Metagenomic 16s rRNA investigation of microbial communities in the Black Sea estuaries in South-West of Ukraine.
O Bobrova, JB Kristoffersen, A Oulas, V Ivanytsia
Acta Biochimica Polonica 63 (2), 315-319, 2016
82016
Optimized R functions for analysis of ecological community data using the R virtual laboratory (RvLab)
C Varsos, T Patkos, A Oulas, C Pavloudi, A Gougousis, UZ Ijaz, ...
Biodiversity data journal, 2016
82016
Pyrosequencing analysis of microbial communities reveals dominant cosmopolitan phylotypes in deep-sea sediments of the eastern Mediterranean Sea
PN Polymenakou, CA Christakis, M Mandalakis, A Oulas
Research in microbiology 166 (5), 448-457, 2015
82015
The system can't perform the operation now. Try again later.
Articles 1–20