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Nestoras Karathanasis
Nestoras Karathanasis
Postdoctoral researcher, The Cyprus Institute of Neurology and Genetics
Verified email at cing.ac.cy
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Cited by
Cited by
Year
Combining evidence from four immune cell types identifies DNA methylation patterns that implicate functionally distinct pathways during Multiple Sclerosis progression
E Ewing, L Kular, SJ Fernandes, N Karathanasis, V Lagani, S Ruhrmann, ...
EBioMedicine 43, 411-423, 2019
552019
GluA2 mRNA distribution and regulation by miR-124 in hippocampal neurons
VM Ho, LO Dallalzadeh, N Karathanasis, MF Keles, S Vangala, T Grogan, ...
Molecular and Cellular Neuroscience 61, 1-12, 2014
552014
Prediction of miRNA targets
A Oulas, N Karathanasis, A Louloupi, GA Pavlopoulos, P Poirazi, ...
RNA Bioinformatics, 207-229, 2015
492015
STATegra: Multi-Omics data integration–a conceptual scheme with a bioinformatics pipeline
N Planell, V Lagani, P Sebastian-Leon, F van der Kloet, E Ewing, ...
Frontiers in genetics 12, 620453, 2021
302021
A new microRNA target prediction tool identifies a novel interaction of a putative miRNA with CCND2
A Oulas, N Karathanasis, A Louloupi, I Iliopoulos, K Kalantidis, P Poirazi
RNA biology 9 (9), 1196-1207, 2012
272012
MiRduplexSVM: a high-performing miRNA-duplex prediction and evaluation methodology
N Karathanasis, I Tsamardinos, P Poirazi
PloS one 10 (5), e0126151, 2015
262015
Gene selection for optimal prediction of cell position in tissues from single-cell transcriptomics data
J Tanevski, T Nguyen, B Truong, N Karaiskos, ME Ahsen, X Zhang, C Shu, ...
Life Science Alliance 3 (11), 2020
202020
Non-parametric combination analysis of multiple data types enables detection of novel regulatory mechanisms in T cells of multiple sclerosis patients
SJ Fernandes, H Morikawa, E Ewing, S Ruhrmann, RN Joshi, V Lagani, ...
Scientific reports 9 (1), 11996, 2019
162019
OmicsNPC: applying the non-parametric combination methodology to the integrative analysis of heterogeneous omics data
N Karathanasis, I Tsamardinos, V Lagani
PloS one 11 (11), e0165545, 2016
152016
IsoMiRmap: fast, deterministic and exhaustive mining of isomiRs from short RNA-seq datasets
P Loher, N Karathanasis, E Londin, P F. Bray, V Pliatsika, AG Telonis, ...
Bioinformatics 37 (13), 1828-1838, 2021
122021
Finding cancer-associated miRNAs: methods and tools
A Oulas, N Karathanasis, A Louloupi, P Poirazi
Molecular biotechnology 49, 97-107, 2011
102011
Reproducibility efforts as a teaching tool: A pilot study
N Karathanasis, D Hwang, V Heng, R Abhimannyu, P Slogoff-Sevilla, ...
PLOS Computational Biology 18 (11), e1010615, 2022
82022
Computational identification of miRNAs involved in cancer
A Oulas, N Karathanasis, P Poirazi
MicroRNA and Cancer: Methods and Protocols, 23-41, 2011
72011
Predicting cellular position in the Drosophila embryo from Single-Cell Transcriptomics data
J Tanevski, T Nguyen, B Truong, N Karaiskos, ME Ahsen, X Zhang, C Shu, ...
bioRxiv, 796029, 2019
62019
Machine learning approaches identify genes containing spatial information from single-cell transcriptomics data
P Loher, N Karathanasis
Frontiers in Genetics 11, 612840, 2021
52021
Don't use a cannon to kill the… miRNA mosquito
N Karathanasis, I Tsamardinos, P Poirazi
Bioinformatics 30 (7), 1047-1048, 2014
52014
Machine Learning for Predicting Therapeutic Outcomes in Acute Myeloid Leukemia Patients
N Karathanasis, P Papasavva, A Oulas, GM Spyrou
medRxiv, 2024.02. 29.24303536, 2024
2024
FAIR+ E pathogen data for surveillance and research: lessons from COVID-19
A Neves, I Cuesta, E Hjerde, T Klemetsen, D Salgado, J Van Helden, ...
Frontiers in Public Health 11, 1289945, 2023
2023
ELIXIR-CONVERGE D9. 2 Document where code from the various regional/national data hubs is available; training documentation on data submission by the platforms-relates to tasks …
A Neves, L Dolanski-Aghamanoukjan, W Maier, R Pergl, WN Akerström, ...
Zenodo, 2023
2023
FAIR+ E Pathogen data for surveillance and research
A Neves, I Cuesta, E Hjerde, D Salgado, J van Helden, N Rahman, ...
2023
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