Uwe Ohler
Uwe Ohler
Professor, Max-Delbruck-Center & Humboldt University Berlin / Adjunct Professor, Duke University
Verified email at mdc-berlin.de - Homepage
Cited by
Cited by
A high-resolution root spatiotemporal map reveals dominant expression patterns
SM Brady, DA Orlando, JY Lee, JY Wang, J Koch, JR Dinneny, D Mace, ...
Science 318 (5851), 801-806, 2007
A viral microRNA functions as an orthologue of cellular miR-155
E Gottwein, N Mukherjee, C Sachse, C Frenzel, WH Majoros, JTA Chi, ...
Nature 450 (7172), 1096-1099, 2007
Integrative regulatory mapping indicates that the RNA-binding protein HuR couples pre-mRNA processing and mRNA stability
N Mukherjee, DL Corcoran, JD Nusbaum, DW Reid, S Georgiev, ...
Molecular cell 43 (3), 327-339, 2011
FMRP targets distinct mRNA sequence elements to regulate protein expression
M Ascano, N Mukherjee, P Bandaru, JB Miller, JD Nusbaum, DL Corcoran, ...
Nature 492 (7429), 382-386, 2012
Computational analysis of core promoters in the Drosophila genome
U Ohler, G Liao, H Niemann, GM Rubin
Genome biology 3 (12), 1-12, 2002
Gene expression divergence recapitulates the developmental hourglass model
AT Kalinka, KM Varga, DT Gerrard, S Preibisch, DL Corcoran, J Jarrells, ...
Nature 468 (7325), 811-814, 2010
The viral and cellular microRNA targetome in lymphoblastoid cell lines
RL Skalsky, DL Corcoran, E Gottwein, CL Frank, D Kang, M Hafner, ...
PLoS Pathog 8 (1), e1002484, 2012
PARalyzer: definition of RNA binding sites from PAR-CLIP short-read sequence data
DL Corcoran, S Georgiev, N Mukherjee, E Gottwein, RL Skalsky, ...
Genome biology 12 (8), 1-16, 2011
Viral microRNA targetome of KSHV-infected primary effusion lymphoma cell lines
E Gottwein, DL Corcoran, N Mukherjee, RL Skalsky, M Hafner, ...
Cell host & microbe 10 (5), 515-526, 2011
Transcriptional and posttranscriptional regulation of transcription factor expression in Arabidopsis roots
JY Lee, J Colinas, JY Wang, D Mace, U Ohler, PN Benfey
Proceedings of the National Academy of Sciences 103 (15), 6055-6060, 2006
The MTE, a new core promoter element for transcription by RNA polymerase II
CY Lim, B Santoso, T Boulay, E Dong, U Ohler, JT Kadonaga
Genes & development 18 (13), 1606-1617, 2004
Genome annotation assessment in Drosophila melanogaster
MG Reese, G Hartzell, NL Harris, U Ohler, JF Abril, SE Lewis
Genome research 10 (4), 483-501, 2000
Patterns of flanking sequence conservation and a characteristic upstream motif for microRNA gene identification
UWE Ohler, S Yekta, LP Lim, DP Bartel, CB Burge
Rna 10 (9), 1309-1322, 2004
Predicting cell-type–specific gene expression from regions of open chromatin
A Natarajan, GG Yardımcı, NC Sheffield, GE Crawford, U Ohler
Genome research 22 (9), 1711-1722, 2012
Detecting actively translated open reading frames in ribosome profiling data
L Calviello, N Mukherjee, E Wyler, H Zauber, A Hirsekorn, M Selbach, ...
Nature methods 13 (2), 165-170, 2016
Identification and analysis of eukaryotic promoters: recent computational approaches
U Ohler, H Niemann
TRENDS in Genetics 17 (2), 56-60, 2001
Translocation of sickle cell erythrocyte microRNAs into Plasmodium falciparum inhibits parasite translation and contributes to malaria resistance
G LaMonte, N Philip, J Reardon, JR Lacsina, W Majoros, L Chapman, ...
Cell host & microbe 12 (2), 187-199, 2012
Regnase-1 and roquin regulate a common element in inflammatory mRNAs by spatiotemporally distinct mechanisms
T Mino, Y Murakawa, A Fukao, A Vandenbon, HH Wessels, D Ori, ...
Cell 161 (5), 1058-1073, 2015
Severe COVID-19 is marked by a dysregulated myeloid cell compartment
J Schulte-Schrepping, N Reusch, D Paclik, K Baßler, S Schlickeiser, ...
Cell 182 (6), 1419-1440. e23, 2020
A paired-end sequencing strategy to map the complex landscape of transcription initiation
T Ni, DL Corcoran, EA Rach, S Song, EP Spana, Y Gao, U Ohler, J Zhu
Nature methods 7 (7), 521-527, 2010
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