Martin Frith
Martin Frith
National Institute of Advanced Industrial Science and Technology (AIST), University of Tokyo
Verified email at - Homepage
Cited by
Cited by
MEME Suite: tools for motif discovery and searching
TL Bailey, M Boden, FA Buske, M Frith, CE Grant, L Clementi, J Ren, ...
Nucleic acids research 37 (suppl_2), W202-W208, 2009
The transcriptional landscape of the mammalian genome
P Carninci, T Kasukawa, S Katayama, J Gough, MC Frith, N Maeda, ...
science 309 (5740), 1559-1563, 2005
Antisense transcription in the mammalian transcriptome
S Katayama, Y Tomaru, T Kasukawa, K Waki, M Nakanishi, M Nakamura, ...
Science 309 (5740), 1564-1566, 2005
A promoter-level mammalian expression atlas
Nature 507 (7493), 462-470, 2014
Genome-wide analysis of mammalian promoter architecture and evolution
P Carninci, A Sandelin, B Lenhard, S Katayama, K Shimokawa, ...
Nature genetics 38 (6), 626-635, 2006
Assessing computational tools for the discovery of transcription factor binding sites
M Tompa, N Li, TL Bailey, GM Church, B De Moor, E Eskin, AV Favorov, ...
Nature biotechnology 23 (1), 137-144, 2005
Adaptive seeds tame genomic sequence comparison
SM Kiełbasa, R Wan, K Sato, P Horton, MC Frith
Genome research 21 (3), 487-493, 2011
Rapid evolution of noncoding RNAs: lack of conservation does not mean lack of function
KC Pang, MC Frith, JS Mattick
Trends in genetics 22 (1), 1-5, 2006
Experimental validation of the regulated expression of large numbers of non-coding RNAs from the mouse genome
T Ravasi, H Suzuki, KC Pang, S Katayama, M Furuno, R Okunishi, ...
Genome research 16 (1), 11-19, 2006
Genomic targets of nuclear estrogen receptors
R O’Lone, MC Frith, EK Karlsson, U Hansen
Molecular endocrinology 18 (8), 1859-1875, 2004
Detection of functional DNA motifs via statistical over‐representation
MC Frith, Y Fu, L Yu, JF Chen, U Hansen, Z Weng
Nucleic acids research 32 (4), 1372-1381, 2004
Long-read sequencing identifies GGC repeat expansions in NOTCH2NLC associated with neuronal intranuclear inclusion disease
J Sone, S Mitsuhashi, A Fujita, T Mizuguchi, K Hamanaka, K Mori, H Koike, ...
Nature genetics 51 (8), 1215-1221, 2019
Discovering sequence motifs with arbitrary insertions and deletions
MC Frith, NFW Saunders, B Kobe, TL Bailey
PLoS computational biology 4 (5), e1000071, 2008
Cluster-Buster: Finding dense clusters of motifs in DNA sequences
MC Frith, MC Li, Z Weng
Nucleic acids research 31 (13), 3666-3668, 2003
Detection of cis -element clusters in higher eukaryotic DNA
MC Frith, U Hansen, Z Weng
Bioinformatics 17 (10), 878-889, 2001
Genomics: The amazing complexity of the human transcriptome.
MC Frith, M Pheasant, JS Mattick
European Journal of Human Genetics 13 (8), 2005
A code for transcription initiation in mammalian genomes
MC Frith, E Valen, A Krogh, Y Hayashizaki, P Carninci, A Sandelin
Genome research 18 (1), 1-12, 2008
The abundance of short proteins in the mammalian proteome
MC Frith, AR Forrest, E Nourbakhsh, KC Pang, C Kai, J Kawai, P Carninci, ...
PLoS genetics 2 (4), e52, 2006
Finding functional sequence elements by multiple local alignment
MC Frith, U Hansen, JL Spouge, Z Weng
Nucleic acids research 32 (1), 189-200, 2004
Adding unaligned sequences into an existing alignment using MAFFT and LAST
K Katoh, MC Frith
Bioinformatics 28 (23), 3144-3146, 2012
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